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1

Differences in Cortisol Response to Trauma Activation in Individuals with and without Comorbid PTSD and Depression

Dekel, Sharon, Ein-Dor, Tsachi, Rosen, Jeffrey B., Bonanno, George A.

Journal:

Frontiers in Psychology

Year:

2017

Language:

english

File:

PDF, 861 KB

english, 2017

2

Functional assignment of multiple catabolic pathways for d-apiose

Carter, Michael S., Zhang, Xinshuai, Huang, Hua, Bouvier, Jason T., Francisco, Brian San, Vetting, Matthew W., Al-Obaidi, Nawar, Bonanno, Jeffrey B., Ghosh, Agnidipta, Zallot, Rémi G., Andersen, Harve

Journal:

Nature Chemical Biology

Year:

2018

Language:

english

File:

PDF, 1.95 MB

english, 2018

3

Structural Basis of CD160:HVEM Recognition

Liu, Weifeng, Garrett, Sarah C., Fedorov, Elena V., Ramagopal, Udupi A., Garforth, Scott J., Bonanno, Jeffrey B., Almo, Steven C.

Journal:

Year:

2019

Language:

english

File:

PDF, 3.83 MB

english, 2019

4

Monitoring in emotion regulation: behavioral decisions and neural consequences

Dorman Ilan, Shirel, Shafir, Roni, Birk, Jeffrey L, Bonanno, George A, Sheppes, Gal

Journal:

Social Cognitive and Affective Neuroscience

Year:

2019

File:

PDF, 818 KB

2019

5

Cortisol and PTSD Symptoms Among Male and Female High-Exposure 9/11 Survivors

Dekel, Sharon, Ein-Dor, Tsachi, Gordon, Kathleen M., Rosen, Jeffrey B., Bonanno, George A.

Journal:

Journal of Traumatic Stress

Year:

2013

Language:

english

File:

PDF, 94 KB

english, 2013

6

X-ray and EPR Characterization of the Auxiliary Fe–S Clusters in the Radical SAM Enzyme PqqE

Barr, Ian, Stich, Troy A., Gizzi, Anthony S., Grove, Tyler L., Bonanno, Jeffrey B., Latham, John A., Chung, Tyler, Wilmot, Carrie M., Britt, R. David, Almo, Steven C., Klinman, Judith P.

Journal:

Year:

2018

Language:

english

File:

PDF, 3.64 MB

english, 2018

7

Stilbene epoxidation and detoxification in a Photorhabdus luminescens -nematode symbiosis

Park, Hyun Bong, Sampathkumar, Parthasarathy, Perez, Corey E., Lee, Joon Ha, Tran, Jeannie, Bonanno, Jeffrey B., Hallem, Elissa A., Almo, Steven C., Crawford, Jason M.

Journal:

Journal of Biological Chemistry

Year:

2017

Language:

english

File:

PDF, 1.82 MB

english, 2017

8

The syntheses, structures and reactivity of bis(tert-butylcyclopentadienyl)molybdenum derivatives: nitrogen alkylation of an η2-acetonitrile ligand and influence of the chalcogen on the barrier to inversion of chalcogenoether adducts

Shin, Jun Ho, Savage, William, Murphy, Vincent J., Bonanno, Jeffrey B., Churchill, David G., Parkin, Gerard

Journal:

Journal of the Chemical Society Dalton Transactions

Year:

2001

Language:

english

File:

PDF, 581 KB

english, 2001

9

Structural Insights into Thioether Bond Formation in the Biosynthesis of Sactipeptides.

Grove, Tyler L., Himes, Paul Michael, Hwang, Sungwon, Yumerefendi, Hayretin, Bonanno, Jeffrey B., Kuhlman, Brian, Almo, Steven C., Bowers, Albert A.

Journal:

Journal of the American Chemical Society

Year:

2017

Language:

english

File:

PDF, 6.00 MB

english, 2017

10

Crystal structure of the Streptococcus pneumoniae phosphomevalonate kinase, a member of the GHMP kinase superfamily

Michael J. Romanowski, Jeffrey B. Bonanno, Stephen K. Burley

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2002

Language:

english

File:

PDF, 1.27 MB

english, 2002

11

Amide derivatives of tantalum and a niobium-promoted ring opening of 3,5-lutidine

Jeffrey B. Bonanno, Adam S. Veige, Peter T. Wolczanski, Emil B. Lobkovsky

Journal:

Inorganica Chimica Acta

Year:

2003

Language:

english

File:

PDF, 466 KB

english, 2003

12

Sequence, structure, function, immunity: structural genomics of costimulation

Kausik Chattopadhyay, Eszter Lazar-Molnar, Qingrong Yan, Rotem Rubinstein, Chenyang Zhan, Vladimir Vigdorovich, Udupi A. Ramagopal, Jeffrey Bonanno, Stanley G. Nathenson, Steven C. Almo

Journal:

Immunological Reviews

Year:

2009

Language:

english

File:

PDF, 2.83 MB

english, 2009

13

[Me2Si] Ansa bridged complexes of permethyltitanocene: synthesis and structural characterization of fulvene derivatives with trialkylidenemethane character †

Lee, Hyosun, Bonanno, Jeffrey B., Hascall, Tony, Cordaro, Joseph, Hahn, Juliet M., Parkin, Gerard

Journal:

Journal of the Chemical Society Dalton Transactions

Year:

1999

Language:

english

File:

PDF, 153 KB

english, 1999

14

Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens by SAD with a large asymmetric unit

Krishnamurthy N. Rao, Jeffrey B. Bonanno, Stephen K. Burley, Subramanyam Swaminathan

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2006

Language:

english

File:

PDF, 853 KB

english, 2006

15

Target selection and annotation for the structural genomics of the amidohydrolase and enolase superfamilies

Ursula Pieper, Ranyee Chiang, Jennifer J. Seffernick, Shoshana D. Brown, Margaret E. Glasner, Libusha Kelly, Narayanan Eswar, J. Michael Sauder, Jeffrey B. Bonanno, Subramanyam Swaminathan, Stephen K.

Journal:

Journal of Structural and Functional Genomics

Year:

2009

Language:

english

File:

PDF, 716 KB

english, 2009

16

X-ray structure of an M. jannaschii DNA-binding protein: Implications for antibiotic resistance in S. aureus

Soumya S. Ray, Jeffrey B. Bonanno, Hua Chen, Herminia de Lencastre, Shangwei Wu, Alexander Tomasz, Stephen K. Burley

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 170 KB

english, 2003

17

Crystal structure of the Escherichia coli glucose-inhibited division protein B (GidB) reveals a methyltransferase fold

Michael J. Romanowski, Jeffrey B. Bonanno, Stephen K. Burley

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2002

Language:

english

File:

PDF, 1.76 MB

english, 2002

18

Cocrystal Structures of Diaminopimelate Decarboxylase: Mechanism, Evolution, and Inhibition of an Antibiotic Resistance Accessory Factor

Soumya S. Ray, Jeffrey B. Bonanno, K.R. Rajashankar, Mariana G. Pinho, Guoshun He, Herminia De Lencastre, Alexander Tomasz, Stephen K. Burley

Journal:

Year:

2002

Language:

english

File:

PDF, 775 KB

english, 2002

19

A Monovalent Gallium Complex Supported by Tris(3,5-di- tert -butylpyrazolyl)hydroborato Ligation: The Syntheses and Structures of [Tp But2 ]Ga and Its GaI 3 Adduct, [Tp But2 ]Ga→GaI 31

Kuchta, Matthew C., Bonanno, Jeffrey B., Parkin, Gerard

Journal:

Journal of the American Chemical Society

Year:

1996

Language:

english

File:

PDF, 77 KB

english, 1996

20

Structure, Dynamics, Evolution, and Function of a Major Scaffold Component in the Nuclear Pore Complex

Sampathkumar, Parthasarathy, Kim, Seung Joong, Upla, Paula, Rice, William J., Phillips, Jeremy, Timney, Benjamin L., Pieper, Ursula, Bonanno, Jeffrey B., Fernandez-Martinez, Javier, Hakhverdyan, Zhann

Journal:

Year:

2013

Language:

english

File:

PDF, 1.86 MB

english, 2013

21

Comparison of Alicyclobacillus acidocaldarius o -Succinylbenzoate Synthase to Its Promiscuous N -Succinylamino Acid Racemase/ o -Succinylbenzoate Synthase Relatives

Odokonyero, Denis, McMillan, Andrew W., Ramagopal, Udupi A., Toro, Rafael, Truong, Dat P., Zhu, Mingzhao, Lopez, Mariana S., Somiari, Belema, Herman, Meghann, Aziz, Asma, Bonanno, Jeffrey B., Hull, Ke

Journal:

Year:

2018

Language:

english

File:

PDF, 2.89 MB

english, 2018

22

Structure of the C-terminal domain of Saccharomyces cerevisiae Nup133, a component of the nuclear pore complex

Parthasarathy Sampathkumar, Tarun Gheyi, Stacy A. Miller, Kevin T. Bain, Mark Dickey, Jeffrey B. Bonanno, Seung Joong Kim, Jeremy Phillips, Ursula Pieper, Javier Fernandez-Martinez, Josef D. Franke, A

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2011

Language:

english

File:

PDF, 293 KB

english, 2011

23

Pnictogen-Hydride Activation by (silox) 3 Ta (silox = t Bu 3 SiO); Attempts to Circumvent the Constraints of Orbital Symmetry in N 2 Activation

Hulley, Elliott B., Bonanno, Jeffrey B., Wolczanski, Peter T., Cundari, Thomas R., Lobkovsky, Emil B.

Journal:

Inorganic Chemistry

Year:

2010

Language:

english

File:

PDF, 4.33 MB

english, 2010

24

Structural Basis of CD160:HVEM Recognition

Liu, Weifeng, Garrett, Sarah C., Fedorov, Elena V., Ramagopal, Udupi A., Garforth, Scott J., Bonanno, Jeffrey B., Almo, Steven C.

Journal:

Year:

2019

File:

PDF, 3.83 MB

2019

25

X-ray structure of Saccharomyces cerevisiae homologous mitochondrial matrix factor 1 (Hmf1)

Alexandra M. Deaconescu, Antonina Roll-Mecak, Jeffrey B. Bonanno, Sue Ellen Gerchman, Helen Kycia, F. William Studier, Stephen K. Burley

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2002

Language:

english

File:

PDF, 1.37 MB

english, 2002

26

Structural genomics of protein phosphatases

Steven C. Almo, Jeffrey B. Bonanno, J. Michael Sauder, Spencer Emtage, Teresa P. Dilorenzo, Vladimir Malashkevich, Steven R. Wasserman, S. Swaminathan, Subramaniam Eswaramoorthy, Rakhi Agarwal, Desiga

Journal:

Journal of Structural and Functional Genomics

Year:

2007

Language:

english

File:

PDF, 1.30 MB

english, 2007

27

Structures of the L27 domain of Disc Large homolog 1 protein illustrate a self-assembly module

Ghosh, Agnidipta, Ramagopal, Udupi A, Bonanno, Jeffrey B., Brenowitz, Michael D, Almo, Steven C.

Journal:

Year:

2017

Language:

english

File:

PDF, 4.85 MB

english, 2017

28

Crystal structures of two putative phosphoheptose isomerases

Jayaraman Seetharaman, Kanagalaghatta R. Rajashankar, Veronica Solorzano, Ryan Kniewel, Christopher D. Lima, Jeffrey B. Bonanno, Stephen K. Burley, Subramanyam Swaminathan

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2006

Language:

english

File:

PDF, 218 KB

english, 2006

29

10.1038/13783

Burley, Stephen K, Almo, Steven C, Bonanno, Jeffrey B, Capel, Malcolm, Chance, Mark R, Gaasterland, Terry, Lin, Dawei, Šali, Andrej, Studier, F. William, Swaminathan, Subramanyam

Journal:

Nature Genetics

Year:

1999

Language:

english

File:

PDF, 347 KB

english, 1999

30

Evidence for Strong Tantalum-to-Boron Dative Interactions in (silox) 3 Ta(BH 3 ) and (silox) 3 Ta(η 2 -B,Cl-BCl 2 Ph) (silox = t Bu 3 SiO) 1

Bonanno, Jeffrey B., Henry, Thomas P., Wolczanski, Peter T., Pierpont, Aaron W., Cundari, Thomas R.

Journal:

Inorganic Chemistry

Year:

2007

Language:

english

File:

PDF, 379 KB

english, 2007

31

Structural Studies of the [Tris(imidazolyl)phosphine]metal Nitrate Complexes {[Pim Pri,But ]M(NO 3 )} + (M = Co, Cu, Zn, Cd, Hg): Comparison of Nitrate-Binding Modes in Synthetic Analogues of Carbonic Anhydrase

Kimblin, Clare, Murphy, Vincent J., Hascall, Tony, Bridgewater, Brian M., Bonanno, Jeffrey B., Parkin, Gerard

Journal:

Inorganic Chemistry

Year:

2000

Language:

english

File:

PDF, 157 KB

english, 2000

32

Mechanistic dissection of the PD-L1:B7-1 co-inhibitory immune complex

Garrett-Thomson, Sarah C., Massimi, Aldo, Fedorov, Elena V., Bonanno, Jeffrey B., Scandiuzzi, Lisa, Hillerich, Brandan, Seidel, Ronald D., Love, James D., Garforth, Scott J., Guha, Chandan, Almo, Stev

Journal:

Year:

2020

File:

PDF, 2.98 MB

2020

33

Bis(permethylindenyl) Complexes of Thorium: Synthesis, Structure, and Reactivity

Trnka, Tina M., Bonanno, Jeffrey B., Bridgewater, Brian M., Parkin, Gerard

Journal:

Organometallics

Year:

2001

Language:

english

File:

PDF, 200 KB

english, 2001

34

Structural Context of Disease-Associated Mutations and Putative Mechanism of Autoinhibition Revealed by X-Ray Crystallographic Analysis of the EZH2-SET Domain

Antonysamy, Stephen, Condon, Bradley, Druzina, Zhanna, Bonanno, Jeffrey B., Gheyi, Tarun, Zhang, Feiyu, MacEwan, Iain, Zhang, Aiping, Ashok, Sheela, Rodgers, Logan, Russell, Marijane, Gately Luz, John

Journal:

Year:

2013

Language:

english

File:

PDF, 3.35 MB

english, 2013

35

Crystal structure of trehalose-6-phosphate phosphatase–related protein: Biochemical and biological implications

Krishnamurthy N. Rao, Desigan Kumaran, Jayaraman Seetharaman, Jeffrey B. Bonanno, Stephen K. Burley, Subramanyam Swaminathan

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 558 KB

english, 2006

36

Structural genomics

Jeffrey Bonanno

Journal:

Current Biology

Year:

1999

Language:

english

File:

PDF, 84 KB

english, 1999

37

Crystal structure of phosphatidylglycerophosphatase (PGPase), a putative membrane-bound lipid phosphatase, reveals a novel binuclear metal binding site and two “proton wires”

Desigan Kumaran, Jeffrey B. Bonanno, Stephen K. Burley, Subramanyam Swaminathan

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2006

Language:

english

File:

PDF, 813 KB

english, 2006

38

Structural genomics of proteins from conserved biochemical pathways and processes

Stephen K Burley, Jeffrey B Bonanno

Journal:

Current Opinion in Structural Biology

Year:

2002

Language:

english

File:

PDF, 145 KB

english, 2002

39

S TRUCTURING THE U NIVERSE OF P ROTEINS

Burley, Stephen K., Bonanno, Jeffrey B.

Journal:

Annual Review of Genomics and Human Genetics

Year:

2002

Language:

english

File:

PDF, 891 KB

english, 2002

40

Structural basis for cancer immunotherapy by the first-in-class checkpoint inhibitor ipilimumab

Ramagopal, Udupi A., Liu, Weifeng, Garrett-Thomson, Sarah C., Bonanno, Jeffrey B., Yan, Qingrong, Srinivasan, Mohan, Wong, Susan C., Bell, Alasdair, Mankikar, Shilpa, Rangan, Vangipuram S., Deshpande,

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 2.48 MB

english, 2017

41

Structure of a putative BenF-like porin from Pseudomonas fluorescens Pf-5 at 2.6 Å resolution

Parthasarathy Sampathkumar, Frances Lu, Xun Zhao, Zhenzhen Li, Jeremiah Gilmore, Kevin Bain, Marc E. Rutter, Tarun Gheyi, Kenneth D. Schwinn, Jeffrey B. Bonanno, Ursula Pieper, J. Eduardo Fajardo, And

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2010

Language:

english

File:

PDF, 2.78 MB

english, 2010

42

Mechanistic Basis for Functional Promiscuity in the TNF and TNF Receptor Superfamilies: Structure of the LIGHT:DcR3 Assembly

Liu, Weifeng, Zhan, Chenyang, Cheng, Huiyong, Kumar, P. Rajesh, Bonanno, Jeffrey B., Nathenson, Stanley G., Almo, Steven C.

Journal:

Year:

2014

Language:

english

File:

PDF, 3.01 MB

english, 2014

43

1-Methylthio- d -xylulose 5-Phosphate Methylsulfurylase: A Novel Route to 1-Deoxy- d -xylulose 5-Phosphate in Rhodospirillum rubrum

Warlick, Benjamin P., Evans, Bradley S., Erb, Tobias J., Ramagopal, Udipi A., Sriram, Jaya, Imker, Heidi J., Sauder, J. Michael, Bonanno, Jeffrey B., Burley, Stephen K., Tabita, F. Robert, Almo, Steve

Journal:

Year:

2012

Language:

english

File:

PDF, 835 KB

english, 2012

44

Synthesis and structure of [BpBut,Pri]2Co: a bis(pyrazolyl)hydroborato cobalt(II) complex with trans [Co · · · H–B] interactions

Ghosh, Prasenjit, Bonanno, Jeffrey B., Parkin, Gerard

Journal:

Journal of the Chemical Society Dalton Transactions

Year:

1998

Language:

english

File:

PDF, 92 KB

english, 1998

45

A binary arginine methylation switch on histone H3 Arginine 2 regulates its interaction with WDR5

Lorton, Benjamin M., Harijan, Rajesh K., Burgos, Emmanuel S., Bonanno, Jeffrey B., Almo, Steven C., Shechter, David

Journal:

Year:

2020

Language:

english

File:

PDF, 1.18 MB

english, 2020

46

Structural genomics: A pipeline for providing structures for the biologist

Mark R. Chance, Anne R. Bresnick, Stephen K. Burley, Jian-Sheng Jiang, Christopher D. Lima, Andrej Sali, Steven C. Almo, Jeffrey B. Bonanno, John A. Buglino, Simon Boulton, Hua Chen, Narayanan Eswar,

Journal:

Protein Science

Year:

2002

Language:

english

File:

PDF, 6.21 MB

english, 2002

47

X-Ray Structure of a Rex-Family Repressor/NADH Complex Insights into the Mechanism of Redox Sensing

E. Allen Sickmier, Dimitris Brekasis, Shanthi Paranawithana, Jeffrey B. Bonanno, Mark S.B. Paget, Stephen K. Burley, Clara L. Kielkopf

Journal:

Year:

2005

Language:

english

File:

PDF, 814 KB

english, 2005

48

Structure-guided discovery of the metabolite carboxy-SAM that modulates tRNA function

Kim, Jungwook, Xiao, Hui, Bonanno, Jeffrey B., Kalyanaraman, Chakrapani, Brown, Shoshana, Tang, Xiangying, Al-Obaidi, Nawar F., Patskovsky, Yury, Babbitt, Patricia C., Jacobson, Matthew P., Lee, Young

Journal:

Year:

2013

Language:

english

File:

PDF, 779 KB

english, 2013

49

Computation-Facilitated Assignment of the Function in the Enolase Superfamily: A Regiochemically Distinct Galactarate Dehydratase from Oceanobacillus iheyensis ,

Rakus, John F., Kalyanaraman, Chakrapani, Fedorov, Alexander A., Fedorov, Elena V., Mills-Groninger, Fiona P., Toro, Rafael, Bonanno, Jeffrey, Bain, Kevin, Sauder, J. Michael, Burley, Stephen K., Almo

Journal:

Year:

2009

Language:

english

File:

PDF, 4.12 MB

english, 2009

50

Structural Underpinnings of Nitrogen Regulation by the Prototypical Nitrogen-Responsive Transcriptional Factor NrpR

Goragot Wisedchaisri, David M. Dranow, Thomas J. Lie, Jeffrey B. Bonanno, Yury Patskovsky, Sinem A. Ozyurt, J. Michael Sauder, Steven C. Almo, Stephen R. Wasserman, Stephen K. Burley, John A. Leigh, T

Journal:

Year:

2010

Language:

english

File:

PDF, 1.87 MB

english, 2010

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